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Structural Biochemistry and Bioinformatics
Sequence alignment and databases

Sequence alignment and databases

Today we are going to learn how to use sequence alignment tools to search databases. The tools we are going to use are FastA, BLAST and SSearch.

The exercise consist of three parts:

  1. Database search with FastA, BLAST and SSsearch
  2. NCSA Biology Workbench
  3. BLAST and FastA

Arne Elofsson
Last modified: Thu Nov 11 16:05:26 CET 2004